articles

  1. C. T. John. Be Yourself and Learn Computer Science. UT-Austin Faculty Innovation Center Blog, August 30, 2019.
  2. C. T. John. What Value Could Fractals Add to Biomedical Image Analysis? Biomedical Computation Review, p. 29, November 16, 2017.

journal papers

  1. C. T. John, A. Seth, M. H. Schwartz, S. L. Delp. Contributions of muscles to mediolateral ground reaction force over a range of walking speeds. Journal of Biomechanics, vol 45, pp 2438-2443, 2012.
  2. C. T. John, F. C. Anderson, J. S. Higginson, S. L. Delp. Stabilisation of walking by intrinsic muscle properties revealed in a three-dimensional muscle-driven simulation. Computer Methods in Biomechanics and Biomedical Engineering, pp 1-12, 2012.
  3. C. A. Chen, W. Lu, C. T. John, B. A. Hargreaves, S. B. Reeder, S. L. Delp, R. A. Siston, G. E. Gold. Multi-Echo IDEAL-GRE Water-Fat Separation for Rapid Assessment of Cartilage Morphology--Initial Experience. Radiology 252(2): 561-567, 2009.
  4. S. L. Delp F. C. Anderson, A. S. Arnold, P. Loan, A. Habib, C. T. John, E. Guendelman, D. G. Thelen. OpenSim: Open-source Software to Create and Analyze Dynamic Simulations of Movement. IEEE Transactions on Biomedical Engineering 54(11): 1940-1950, 2007.
  5. C. T. John. All Bézier Curves Are Attractors of Iterated Function Systems. New York Journal of Mathematics 13(7): 107-115, 2007.

books

  1. C. T. John. PhorbiDden PhooD: Real Secrets to Mastering the PhD Adventure. CafePress, 177 pages, 2013.
  2. C. T. John. Lead Editor of The CS Redbook, an advice book for Stanford Computer Science PhD students. I expanded the book to include input from women in computer science. 2008-2011.

book chapter

  1. C. T. John. Visualization by Subdivision: Two Applications for Future Graphics Platforms. In E. John and J. Rubio (eds.), Unique Chips and Systems, chapter 9, pp. 239-258, CRC Press, 2008.

technical reports

  1. C. T. John. Thoughts on Hybrid Systems. The University of Texas at Austin, Department of Computer Sciences, Technical Report CS-TR-03-22, 6 pages, 2003.
  2. C. T. John, M. P. Marder. Cloud Formation: Simulating the Evolution of Water Droplet Populations. Center for Nonlinear Dynamics, Department of Physics, University of Texas at Austin, Austin, TX. 20 pages, 2003.

conference papers

  1. C. T. John, B. Dariush. Dynamically Consistent Human Movement Prediction for Interactive Vehicle Occupant Package Design. Digital Human Modeling, Tokyo, Japan, May 2014.
  2. C. T. John. Visualization by Subdivision: Two Applications for Future Graphics Platforms. Workshop on Unique Chips and Systems (UCAS-1), pages 12-19, Austin, Texas, USA, March 20, 2005.

conference presentations

  1. C. T. John, Comics for Equitable Teaching of Really Hard Science. Science Talk '24, Short Talks: Intersections in SciComm; The 5 E's of SciComm; Comics for Teaching, April 5, 2024. (LinkedIn)
  2. C. T. John, Lightning Talk #1: Fighting Biases in STEM Using Comics and Inclusive Teaching. 2023 Texas Women and Girls in STEM Summit, December 1, 2023.
  3. C. T. John, F. C. Anderson, E. Guendelman, J. S. Higginson, S. L. Delp. Long-Duration Muscle-Actuated Simulations of Walking at Multiple Speeds. American Society of Biomechanics, Stanford, California, USA, August 22-25, 2007.
  4. C. T. John, F. C. Anderson, E. Guendelman, J. S. Higginson, S. L. Delp. Generating 3D Muscle-Actuated Simulations of Normal and Pathological Walking. Dynamic Walking III, Mariehamn, Åland, Finland, June 25-29, 2007.

invited presentations

  1. C. T. John. Speaker. C S 312 Pod (2 sessions, ~65 students). October 13, 2021.
  2. C. T. John. STEM careers. Spoke to 6th-11th grade students. UTeach UT PREP STEM Speaker Series, June 21, 2021.
  3. C. T. John. Invited speaker on failure & mental health. Professor Panel, Wellness Week, Association of Computing Machinery (ACM) for Change, May 5, 2021.
  4. C. T. John. Mentor and speaker. UT-Austin Women in Computer Science (WiCS) Faculty Lunch, November 16, 2020.
  5. C. T. John. Mentor and speaker. UT-Austin Women in Computer Science (WiCS) Faculty Lunch, November 9, 2020.
  6. C. T. John. Mentor and speaker on cultural issues in computer science and career paths. UT-Austin Women in Computer Science (WiCS) Faculty Lunch, November 2, 2020.
  7. C. T. John. Invited speaker to student group (39% women). CS Pod, UT-Austin, October 14, 2020.
  8. C. T. John. Universal Design for Learning (UDL). University of Tennessee Health Sciences Center (UTHSC), September 17, 2020.
  9. C. T. John. Unconscious Bias. Assistant Dean of Strategy and Planning at UT-Austin College of Natural Sciences, July 24, 2020.
  10. C. T. John. Unconscious Bias. NXP Semiconductors Women's Leadership Team (WLT), May 1, 2020. In collaboration with Breaking the Glass.
  11. C. T. John. Panelist on first-ever Dean's Scholars Alumni Panel, November 22, 2019.
  12. C. T. John. Mentor. Women in Computer Science (WiCS) Faculty Lunch, UT-Austin, November 7, 2019.
  13. C. T. John. Mentor. Women in Computer Science (WiCS) Faculty Lunch, UT-Austin, October 31, 2019.
  14. C. T. John. Mentor. Women in Computer Science (WiCS) Faculty Lunch, UT-Austin, October 24, 2019.
  15. C. T. John. CS Pods Professor Week, October 23, 2019. Invited to speak to CS 312 (28% women) and CS 311/314 (40% women) students as "one of our most student-friendly professors."
  16. C. T. John. Learn Computer Science via the Arts. #UDLHE Digicon (Universal Design for Learning Higher Education Digital Conference), October 18, 2019.
  17. C. T. John. Comics, Celebrities, Music, and Animation: A Whimsical, Yet Deep Look at Computer Science. On 3-faculty panel at the Celebrating Ten Years of Flags Symposium, October 11, 2019.
  18. C. T. John. Breaking the Glass' Unconscious Bias webinar, Rocky Mountain Women in Cable Tech (WICT), August 13, 2019.
  19. C. T. John. Academic research in robotics-inspired human movement science and industry work in surgical robotics. UT-Austin Robotics Camp for 9th-12th grade students, August 2, 2019. Feedback stated that, "They really enjoyed your talk! It was nice to show them a different perspective of robotics and I think you really opened their eyes to some cool research."
  20. C. T. John. Writing programs to create and play music. UT PREP Summer Camp, June 26, 2019. Feedback from the organizers stated, "We want to sincerely thank you for taking time to visit with our students today. Our students and staff told us that your use of music and melody to teach fundamentals of computer science was unlike anything they had experienced before. It was a unique application of this material that they had not considered until today. It was a joy to have you as part of our speaker line-up this year and we hope to keep you on our contact list for next year."
  21. C. T. John. Python robotics programming 90-minute lab. First Bytes & Code Longhorn Summer Camps for high school girls & students from marginaliezd groups by University of Texas at Austin's Department of Computer Science, June 6, 20, and 27, 2019.
  22. C. T. John. Computer science & software engineering career paths. 6th-8th grade STEM class, Gasquet Mountain School, December 6, 2018.
  23. C. T. John. Mentor at Breaking the Glass + Charles Schwab Speed Networking for Women in Tech, November 28, 2018.
  24. C. T. John. Unconscious Bias Workshop. BigCommerce, Austin, TX, November 8, 2018.
  25. C. T. John. What it means to be a computer scientist and software engineer. Don Callejon School, Santa Clara, CA, December 1, 2016.
  26. C. T. John. Co-Organizer & Kickoff Speaker. Stanford's first-ever PhD Career Strategy Workshop, July 2014.
  27. C. T. John. Speaker, Stanford Career Education. Gave career advice to PhD students, organized a panel discussion with students and alumni on issues relating to PhDs seeking industry careers. Stanford Career Development Center, September 2013.
  28. C. T. John. Created and moderated the Stanford Product Management Seminar series. Ran 5 seminars averaging ~35 attendees each; led to at least 5 more seminars in 2012-2013. Interviewed engineers-turned-product managers, startup founders, and marketing directors. Secured sponsorship from Stanford Computer Forum and raised funds from a speaker's company. Aug-Dec 2011.
  29. C. T. John. Can computers tell us how to keep people from falling? Selected for presentation at Opportunity Job Fair, Stanford University School of Engineering, January 28, 2011.
  30. C. T. John. How can a CS researcher focus their career on biomechanics? Seminar on Human, Avatar, and Robot Motion, Stanford University, January 25, 2011.
  31. J. S. Faruque, C. T. John. Starting College Early. A Discussion with Two Students that Did it. Stanford Splash! November 13, 2010.
  32. C. T. John. Can mathematics cure all walking disorders? Mathematical & Computational Biology Seminar, Department of Mathematics, UC-Berkeley, December 9, 2009.
  33. C. T. John. Non-technical speech on human walking research, including passive dynamics, potential energy, kinetic energy, and gravity and their roles in walking and other movements, during the class Dance 139: Liquid Flow, Intermediate Modern Dance, at Stanford University, October 2, 2009.
  34. C. T. John. Slicer & Simbios. SimTK Tech Meeting, National Center for Physics-Based Simulation of Biological Structures (Simbios), Stanford University, February 12, 2007.
  35. C. T. John. Generating 3D Muscle-Actuated Simulations of Movement. Manipulation Group Meeting, Stanford Robotics Laboratory, Department of Computer Science, Stanford University, September 12, 2006.
  36. C. T. John. Image Processing with Slicer. Graphics Café, Computer Graphics Laboratory, Department of Computer Science, Stanford University, August 25, 2005.
  37. C. T. John. Features Added to Slicer Image Editor. NA-MIC Programming Week, Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, June 28, 2005.
  38. C. T. John. Collaboration between Simbios and NA-MIC. NA-MIC Programming Week, Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, June 28, 2005.
  39. C. T. John. Subdivision of Plane Curves. Undergraduate Thesis Defense. Supervisor: Chandrajit L. Bajaj, PhD. Second Reader: Sean Keel, PhD. April 28, 2003. (Paper) (Slides)

reviewer

  1. Scholarship Reviewer, ACM Richard Tapia Celebration of Diversity in Computing, 2019
  2. Posters Committee Member, Grace Hopper Celebration (GHC), 2019
  3. Journal of Biomechanics, 2010
  4. SIGGRAPH (ACM Transactions on Graphics), 2009
  5. Computers & Graphics, 2008

conference abstracts

  1. S. R. Hamner, C. T. John, J. S. Higginson, S. L. Delp. Muscle Contributions to Propulsion and Support during Running. American College of Sports Medicine (ACSM) Annual Meeting, Seattle, Washington, USA, May 27-30, 2009.
  2. S. R. Hamner, C. T. John, J. S. Higginson, S. L. Delp. Muscle Contributions to Support and Progression during Running. Gait and Clinical Movement Analysis Society, Denver, Colorado, USA, March 10-13, 2009.
  3. S. R. Hamner, C. T. John, F. C. Anderson, J. S. Higginson, S. L. Delp. Reducing Residual Forces and Moments in a Three-Dimensional Simulation of Running. North American Congress on Biomechanics, Ann Arbor, Michigan, USA, August 5-9, 2008.
  4. F. C. Anderson, E. Guendelman, P. Loan, A. Habib, C. John, A. Arnold, D. Thelen, S. Delp. OpenSim: An Open-Source Platform for Simulating and Analyzing Musculoskeletal Dynamics. American Society of Biomechanics, Stanford, California, USA, August 22-25, 2007.
  5. C. A. Chen, C. T. John, B. A. Hargreaves, S. B. Reeder, S. L. Delp, R. A. Siston, G. E. Gold. Multi-Echo IDEAL-GRE Water-Fat Separation for Rapid Assessment of Cartilage Morphology. ISMRM-ESMRMB (International Society for Magnetic Resonance in Medicine - European Society for Magnetic Resonance in Medicine and Biology) Joint Annual Meeting, Berlin, Germany, May 19-25, 2007.
  6. F. C. Anderson, C. T. John, E. Guendelman, A. S. Arnold, S. L. Delp. SimTrack: Software for Rapidly Generating Muscle-Actuated Simulations of Long-Duration Movement. International Symposium on Biomedical Engineering, Taipei, Taiwan, December 14-16, 2006.

conference posters

  1. C. T. John, M. D. Fox, M. Q. Liu, M. H. Schwartz, S. L. Delp. Muscle Contributions to Medial-Lateral Acceleration of the Body during Walking. Proceedings of the American Society of Mechanical Engineers (ASME) Summer Bioengineering Conference, Resort at Squaw Creek, Olympic Valley, CA, June 17-21, 2009.
  2. S. R. Hamner, C. T. John, S. L. Delp. Muscle Contributions to Propulsion and Support During Running. Biomedical Computation at Stanford (BCATS), Stanford, California, USA, October 25, 2008.
  3. S. R. Hamner, C. T. John, F. C. Anderson, J. S. Higginson, S. L. Delp. Reducing Residual Forces and Moments in a Three-Dimensional Simulation of Running. North American Congress on Biomechanics 2008, Ann Arbor, Michigan, USA, August 5-9, 2008.
  4. C. T. John, F. C. Anderson, E. Guendelman, J. S. Higginson, S. L. Delp. Rapid Generation of 3D Muscle-Driven Simulations of Human Walking. Biomedical Computation at Stanford (BCATS), Stanford, California, USA, October 27, 2007.
  5. S. L. Delp, F. C. Anderson, A. S. Arnold, P. Loan, A. Habib, C. T. John, A. Seth, E. Guendelman, D. G. Thelen, J. A. Reinbolt. OpenSim: Open-source Software for Neuromuscular Biomechanics. Life in Motion Bio-X Symposium, Stanford, California, USA, October 25, 2007.
  6. C. T. John, F. C. Anderson, E. Guendelman, A. S. Arnold, S. L. Delp. An Algorithm for Generating Muscle-Actuated Simulations of Long-Duration Movement. Biomedical Computation at Stanford (BCATS), Stanford, California, USA, October 21, 2006.
  7. C. T. John, S. L. Delp. From Biomedical Images to Geometric Models. Biomedical Computation at Stanford (BCATS), Stanford, California, USA, October 15, 2005.
  8. C. T. John. Characterization of Quadratic Bézier Splines as Attractors of Iterated Function Systems. Nonlinear Dynamics and Pattern Formation Conference, Austin, Texas, USA, June 2000.





    9. Home